Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 AC069544.1-201ENST00000609399 999 ntBASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC50Q8IVM0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 AL031598.1-201ENST00000561511 1773 ntBASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 Z98044.1-201ENST00000632503 1764 ntBASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 HLA-A-209ENST00000638375 975 ntBASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 WIZP1-201ENST00000531444 2299 ntBASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC50Q8IVM0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC50Q8IVM0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CCDC50Q8IVM0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC50Q8IVM0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
CCDC50Q8IVM0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC50Q8IVM0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 AL512353.2-201ENST00000448759 1962 ntBASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC50Q8IVM0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 ID1-201ENST00000376105 1233 ntBASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 TSPY21P-201ENST00000433481 731 ntBASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 AC026366.1-201ENST00000488803 879 ntBASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 AC233263.1-201ENST00000578059 224 ntBASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 MTDHP1-201ENST00000605323 784 ntBASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC50Q8IVM0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms