Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 AC006015.1-201ENST00000429970 570 ntBASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 AC138907.5-202ENST00000569484 235 ntBASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
YTHDF3Q7Z739 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
YTHDF3Q7Z739 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 AL162727.3-201ENST00000635661 2787 ntBASIC18.7■□□□□ 0.58
YTHDF3Q7Z739 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 AC243732.1-201ENST00000612648 864 ntBASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 AC073111.5-205ENST00000641717 521 ntBASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.69■□□□□ 0.58
YTHDF3Q7Z739 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 CDCA4P2-201ENST00000441182 718 ntBASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YTHDF3Q7Z739 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms