Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.84■■□□□ 1.09
OTOP1Q7RTM1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 MIR574-201ENST00000385209 96 ntBASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 TSPY12P-201ENST00000421279 868 ntBASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 AC012615.1-201ENST00000565797 1299 ntBASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 AF228730.7-201ENST00000641842 219 ntBASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.83■■□□□ 1.09
OTOP1Q7RTM1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
OTOP1Q7RTM1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
OTOP1Q7RTM1 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.83■■□□□ 1.08
OTOP1Q7RTM1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
OTOP1Q7RTM1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
OTOP1Q7RTM1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 TSPY22P-201ENST00000427496 604 ntBASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 KRT16P4-201ENST00000453883 522 ntBASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
OTOP1Q7RTM1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.8■■□□□ 1.08
OTOP1Q7RTM1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms