Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
SHC4Q6S5L8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.3■■□□□ 1
SHC4Q6S5L8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SHC4Q6S5L8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SHC4Q6S5L8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHC4Q6S5L8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SHC4Q6S5L8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SHC4Q6S5L8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.29■■□□□ 1
SHC4Q6S5L8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.29■■□□□ 1
SHC4Q6S5L8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.29■■□□□ 1
SHC4Q6S5L8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 CKBP1-201ENST00000565489 1086 ntBASIC21.29■■□□□ 1
SHC4Q6S5L8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SHC4Q6S5L8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SHC4Q6S5L8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SHC4Q6S5L8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.29■■□□□ 1
SHC4Q6S5L8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SHC4Q6S5L8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SHC4Q6S5L8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.28■■□□□ 1
SHC4Q6S5L8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.28■■□□□ 1
SHC4Q6S5L8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.28■■□□□ 1
SHC4Q6S5L8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.28■■□□□ 1
SHC4Q6S5L8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
SHC4Q6S5L8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.28■■□□□ 1
SHC4Q6S5L8 B3GAT3P1-201ENST00000471720 806 ntBASIC21.28■■□□□ 1
SHC4Q6S5L8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
SHC4Q6S5L8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.28■■□□□ 1
SHC4Q6S5L8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.28■■□□□ 1
SHC4Q6S5L8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.28■■□□□ 1
SHC4Q6S5L8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.28■■□□□ 1
SHC4Q6S5L8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SHC4Q6S5L8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
SHC4Q6S5L8 PRORSD1P-201ENST00000295112 541 ntBASIC21.27■■□□□ 1
SHC4Q6S5L8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.27■■□□□ 1
SHC4Q6S5L8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.27■■□□□ 1
SHC4Q6S5L8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.27■■□□□ 1
SHC4Q6S5L8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SHC4Q6S5L8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SHC4Q6S5L8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SHC4Q6S5L8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.27■■□□□ 1
SHC4Q6S5L8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SHC4Q6S5L8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
SHC4Q6S5L8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.26■□□□□ 0.99
SHC4Q6S5L8 FAM201B-201ENST00000458407 597 ntBASIC21.26■□□□□ 0.99
SHC4Q6S5L8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms