Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 AC124016.1-201ENST00000609552 612 ntBASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKAL1Q5VV42 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKAL1Q5VV42 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 PCDHB18P-201ENST00000524813 2368 ntBASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 NIFKP9-201ENST00000419265 221 ntBASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKAL1Q5VV42 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDKAL1Q5VV42 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 AL357033.4-201ENST00000617703 1807 ntBASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.64■□□□□ 0.89
CDKAL1Q5VV42 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 AC091390.4-202ENST00000476426 537 ntBASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 AC131212.4-201ENST00000623606 975 ntBASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKAL1Q5VV42 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.62■□□□□ 0.89
CDKAL1Q5VV42 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKAL1Q5VV42 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKAL1Q5VV42 KRT8P45-201ENST00000414328 1447 ntBASIC20.62■□□□□ 0.89
CDKAL1Q5VV42 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKAL1Q5VV42 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.62■□□□□ 0.89
CDKAL1Q5VV42 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDKAL1Q5VV42 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms