Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC239809.2-201ENST00000415381 517 ntBASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 KRT18P16-201ENST00000510337 1294 ntBASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 AC124016.1-201ENST00000609552 612 ntBASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 AC110285.5-201ENST00000611501 352 ntBASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 TMEM191A-211ENST00000637163 1067 ntBASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 AC141586.3-201ENST00000562166 1838 ntBASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATPAF1Q5TC12 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 RPPH1-201ENST00000516869 333 ntBASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 AC004264.1-201ENST00000608354 794 ntBASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ATPAF1Q5TC12 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 TEX21P-204ENST00000641479 1693 ntBASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 KRASP1-201ENST00000407852 552 ntBASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 C1QBPP2-201ENST00000528754 825 ntBASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ATPAF1Q5TC12 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 AC093525.10-201ENST00000625130 1569 ntBASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ATPAF1Q5TC12 FZD10-202ENST00000539839 3282 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms