Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PRAMEP78395 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEP78395 AC026271.3-201ENST00000571884 352 ntBASIC19.03■□□□□ 0.64
PRAMEP78395 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PRAMEP78395 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.03■□□□□ 0.64
PRAMEP78395 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEP78395 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.03■□□□□ 0.64
PRAMEP78395 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEP78395 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEP78395 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEP78395 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEP78395 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 RCC2P6-201ENST00000526625 1557 ntBASIC19.02■□□□□ 0.64
PRAMEP78395 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.02■□□□□ 0.64
PRAMEP78395 CROCCP3-202ENST00000420820 1947 ntBASIC19.02■□□□□ 0.64
PRAMEP78395 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PRAMEP78395 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PRAMEP78395 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 GCSHP5-201ENST00000443090 522 ntBASIC19.02■□□□□ 0.64
PRAMEP78395 UBE2SP1-201ENST00000450587 669 ntBASIC19.02■□□□□ 0.64
PRAMEP78395 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.02■□□□□ 0.64
PRAMEP78395 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEP78395 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PRAMEP78395 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRAMEP78395 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRAMEP78395 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.02■□□□□ 0.63
PRAMEP78395 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.02■□□□□ 0.63
PRAMEP78395 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.01■□□□□ 0.63
PRAMEP78395 KRT8P11-201ENST00000409686 1436 ntBASIC19.01■□□□□ 0.63
PRAMEP78395 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PRAMEP78395 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.01■□□□□ 0.63
PRAMEP78395 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PRAMEP78395 ABHD17AP1-201ENST00000358206 933 ntBASIC19.01■□□□□ 0.63
PRAMEP78395 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PRAMEP78395 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 AC091390.4-202ENST00000476426 537 ntBASIC19.01■□□□□ 0.63
PRAMEP78395 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.01■□□□□ 0.63
PRAMEP78395 PRSS44-201ENST00000515154 1146 ntBASIC19.01■□□□□ 0.63
PRAMEP78395 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.01■□□□□ 0.63
PRAMEP78395 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.01■□□□□ 0.63
PRAMEP78395 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.01■□□□□ 0.63
PRAMEP78395 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.01■□□□□ 0.63
PRAMEP78395 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.01■□□□□ 0.63
PRAMEP78395 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEP78395 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PRAMEP78395 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19■□□□□ 0.63
PRAMEP78395 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19■□□□□ 0.63
PRAMEP78395 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19■□□□□ 0.63
PRAMEP78395 AC011298.2-201ENST00000617989 482 ntBASIC19■□□□□ 0.63
PRAMEP78395 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19■□□□□ 0.63
PRAMEP78395 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19■□□□□ 0.63
PRAMEP78395 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19■□□□□ 0.63
PRAMEP78395 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19■□□□□ 0.63
PRAMEP78395 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19■□□□□ 0.63
PRAMEP78395 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEP78395 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEP78395 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEP78395 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms