Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.05■□□□□ 0.96
ASIC1P78348 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ASIC1P78348 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
ASIC1P78348 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ASIC1P78348 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.04■□□□□ 0.96
ASIC1P78348 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.04■□□□□ 0.96
ASIC1P78348 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.04■□□□□ 0.96
ASIC1P78348 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ASIC1P78348 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ASIC1P78348 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
ASIC1P78348 NUDT16P1-203ENST00000513809 620 ntBASIC21.04■□□□□ 0.96
ASIC1P78348 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.04■□□□□ 0.96
ASIC1P78348 Z99916.2-201ENST00000604037 246 ntBASIC21.04■□□□□ 0.96
ASIC1P78348 AP001412.1-201ENST00000608405 714 ntBASIC21.04■□□□□ 0.96
ASIC1P78348 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.04■□□□□ 0.96
ASIC1P78348 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ASIC1P78348 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ASIC1P78348 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ASIC1P78348 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ASIC1P78348 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ASIC1P78348 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.04■□□□□ 0.96
ASIC1P78348 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ASIC1P78348 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.04■□□□□ 0.96
ASIC1P78348 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.04■□□□□ 0.96
ASIC1P78348 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ASIC1P78348 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
ASIC1P78348 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.03■□□□□ 0.96
ASIC1P78348 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
ASIC1P78348 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.03■□□□□ 0.96
ASIC1P78348 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ASIC1P78348 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
ASIC1P78348 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.03■□□□□ 0.96
ASIC1P78348 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.03■□□□□ 0.96
ASIC1P78348 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.03■□□□□ 0.96
ASIC1P78348 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.03■□□□□ 0.96
ASIC1P78348 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.03■□□□□ 0.96
ASIC1P78348 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.03■□□□□ 0.96
ASIC1P78348 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.03■□□□□ 0.96
ASIC1P78348 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.03■□□□□ 0.96
ASIC1P78348 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.03■□□□□ 0.96
ASIC1P78348 AP000692.2-201ENST00000608391 879 ntBASIC21.03■□□□□ 0.96
ASIC1P78348 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ASIC1P78348 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ASIC1P78348 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.02■□□□□ 0.96
ASIC1P78348 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.02■□□□□ 0.96
ASIC1P78348 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ASIC1P78348 ANO7L1-203ENST00000602586 1720 ntBASIC21.02■□□□□ 0.96
ASIC1P78348 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.02■□□□□ 0.96
ASIC1P78348 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.02■□□□□ 0.96
ASIC1P78348 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.02■□□□□ 0.96
ASIC1P78348 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.02■□□□□ 0.96
ASIC1P78348 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.02■□□□□ 0.96
ASIC1P78348 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ASIC1P78348 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ASIC1P78348 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.02■□□□□ 0.95
ASIC1P78348 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ASIC1P78348 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
ASIC1P78348 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ASIC1P78348 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ASIC1P78348 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.01■□□□□ 0.95
ASIC1P78348 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.01■□□□□ 0.95
ASIC1P78348 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.01■□□□□ 0.95
ASIC1P78348 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 WIZP1-201ENST00000531444 2299 ntBASIC21.01■□□□□ 0.95
ASIC1P78348 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.01■□□□□ 0.95
ASIC1P78348 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.01■□□□□ 0.95
ASIC1P78348 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ASIC1P78348 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.01■□□□□ 0.95
ASIC1P78348 KRT8P3-201ENST00000519669 1449 ntBASIC21.01■□□□□ 0.95
ASIC1P78348 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ASIC1P78348 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ASIC1P78348 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms