Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC083906.6-201ENST00000641366 219 ntBASIC15.34■□□□□ 0.05
SPCS3P61009 AC073111.5-205ENST00000641717 521 ntBASIC15.34■□□□□ 0.05
SPCS3P61009 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS3P61009 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.34■□□□□ 0.05
SPCS3P61009 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS3P61009 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SPCS3P61009 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SPCS3P61009 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.34■□□□□ 0.05
SPCS3P61009 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.34■□□□□ 0.05
SPCS3P61009 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SPCS3P61009 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.34■□□□□ 0.05
SPCS3P61009 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.34■□□□□ 0.05
SPCS3P61009 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.33■□□□□ 0.05
SPCS3P61009 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.33■□□□□ 0.05
SPCS3P61009 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPCS3P61009 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SPCS3P61009 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
SPCS3P61009 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPCS3P61009 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPCS3P61009 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.33■□□□□ 0.05
SPCS3P61009 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
SPCS3P61009 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
SPCS3P61009 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SPCS3P61009 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SPCS3P61009 HTR7P1-202ENST00000624664 4411 ntBASIC15.33■□□□□ 0.04
SPCS3P61009 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SPCS3P61009 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.33■□□□□ 0.04
SPCS3P61009 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.33■□□□□ 0.04
SPCS3P61009 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.33■□□□□ 0.04
SPCS3P61009 MIPEPP3-201ENST00000412105 444 ntBASIC15.33■□□□□ 0.04
SPCS3P61009 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.33■□□□□ 0.04
SPCS3P61009 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.33■□□□□ 0.04
SPCS3P61009 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.33■□□□□ 0.04
SPCS3P61009 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.33■□□□□ 0.04
SPCS3P61009 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.33■□□□□ 0.04
SPCS3P61009 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.33■□□□□ 0.04
SPCS3P61009 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 AL050303.2-201ENST00000619798 666 ntBASIC15.33■□□□□ 0.04
SPCS3P61009 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SPCS3P61009 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SPCS3P61009 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.33■□□□□ 0.04
SPCS3P61009 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.33■□□□□ 0.04
SPCS3P61009 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SPCS3P61009 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SPCS3P61009 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SPCS3P61009 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.33■□□□□ 0.04
SPCS3P61009 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.33■□□□□ 0.04
SPCS3P61009 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.33■□□□□ 0.04
SPCS3P61009 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SPCS3P61009 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.32■□□□□ 0.04
SPCS3P61009 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.32■□□□□ 0.04
SPCS3P61009 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SPCS3P61009 AC124067.4-201ENST00000519691 2379 ntBASIC15.32■□□□□ 0.04
SPCS3P61009 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SPCS3P61009 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SPCS3P61009 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.32■□□□□ 0.04
SPCS3P61009 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.32■□□□□ 0.04
SPCS3P61009 AC092118.2-201ENST00000613495 667 ntBASIC15.32■□□□□ 0.04
SPCS3P61009 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPCS3P61009 BICD1-207ENST00000551848 1962 ntBASIC15.32■□□□□ 0.04
SPCS3P61009 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms