Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 FEM1AP3-201ENST00000403722 1741 ntBASIC19.98■□□□□ 0.79
CACNA2D1P54289 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA2D1P54289 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA2D1P54289 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.98■□□□□ 0.79
CACNA2D1P54289 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CACNA2D1P54289 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.98■□□□□ 0.79
CACNA2D1P54289 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CACNA2D1P54289 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CACNA2D1P54289 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA2D1P54289 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA2D1P54289 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.97■□□□□ 0.79
CACNA2D1P54289 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.97■□□□□ 0.79
CACNA2D1P54289 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA2D1P54289 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA2D1P54289 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA2D1P54289 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CACNA2D1P54289 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CACNA2D1P54289 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.97■□□□□ 0.79
CACNA2D1P54289 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CACNA2D1P54289 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA2D1P54289 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 AL049812.1-201ENST00000432563 2267 ntBASIC19.96■□□□□ 0.79
CACNA2D1P54289 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA2D1P54289 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA2D1P54289 AC117947.1-201ENST00000427448 529 ntBASIC19.96■□□□□ 0.79
CACNA2D1P54289 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 AC139887.4-201ENST00000607877 719 ntBASIC19.96■□□□□ 0.79
CACNA2D1P54289 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA2D1P54289 AC141257.4-201ENST00000634557 245 ntBASIC19.96■□□□□ 0.79
CACNA2D1P54289 AC136944.6-201ENST00000634818 245 ntBASIC19.96■□□□□ 0.79
CACNA2D1P54289 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CACNA2D1P54289 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA2D1P54289 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA2D1P54289 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA2D1P54289 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA2D1P54289 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 FP475955.4-201ENST00000623131 1990 ntBASIC19.95■□□□□ 0.78
CACNA2D1P54289 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA2D1P54289 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 KRT8P3-201ENST00000519669 1449 ntBASIC19.95■□□□□ 0.78
CACNA2D1P54289 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA2D1P54289 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CACNA2D1P54289 DUX4L26-201ENST00000489078 1255 ntBASIC19.95■□□□□ 0.78
CACNA2D1P54289 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA2D1P54289 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
CACNA2D1P54289 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA2D1P54289 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 AL023284.2-201ENST00000405850 579 ntBASIC19.94■□□□□ 0.78
CACNA2D1P54289 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA2D1P54289 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CACNA2D1P54289 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.93■□□□□ 0.78
CACNA2D1P54289 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA2D1P54289 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CACNA2D1P54289 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms