Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.77■□□□□ 0.92
PMS1P54277 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.77■□□□□ 0.92
PMS1P54277 FAM197Y4-202ENST00000622692 608 ntBASIC20.77■□□□□ 0.92
PMS1P54277 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
PMS1P54277 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PMS1P54277 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PMS1P54277 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.77■□□□□ 0.92
PMS1P54277 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PMS1P54277 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PMS1P54277 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PMS1P54277 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PMS1P54277 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.77■□□□□ 0.91
PMS1P54277 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
PMS1P54277 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.77■□□□□ 0.91
PMS1P54277 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 BICD1-207ENST00000551848 1962 ntBASIC20.76■□□□□ 0.91
PMS1P54277 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PMS1P54277 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
PMS1P54277 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 B3GAT3P1-201ENST00000471720 806 ntBASIC20.76■□□□□ 0.91
PMS1P54277 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
PMS1P54277 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.76■□□□□ 0.91
PMS1P54277 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.76■□□□□ 0.91
PMS1P54277 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PMS1P54277 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PMS1P54277 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.76■□□□□ 0.91
PMS1P54277 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.76■□□□□ 0.91
PMS1P54277 AC026271.3-201ENST00000571884 352 ntBASIC20.76■□□□□ 0.91
PMS1P54277 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.76■□□□□ 0.91
PMS1P54277 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 AL031985.4-201ENST00000642138 673 ntBASIC20.76■□□□□ 0.91
PMS1P54277 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PMS1P54277 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 KRT8P3-201ENST00000519669 1449 ntBASIC20.76■□□□□ 0.91
PMS1P54277 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PMS1P54277 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.76■□□□□ 0.91
PMS1P54277 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
PMS1P54277 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.76■□□□□ 0.91
PMS1P54277 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PMS1P54277 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
PMS1P54277 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PMS1P54277 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PMS1P54277 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.75■□□□□ 0.91
PMS1P54277 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PMS1P54277 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.75■□□□□ 0.91
PMS1P54277 FAM197Y1-201ENST00000421178 764 ntBASIC20.75■□□□□ 0.91
PMS1P54277 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.75■□□□□ 0.91
PMS1P54277 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.75■□□□□ 0.91
PMS1P54277 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PMS1P54277 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PMS1P54277 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PMS1P54277 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.74■□□□□ 0.91
PMS1P54277 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PMS1P54277 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.74■□□□□ 0.91
PMS1P54277 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PMS1P54277 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.74■□□□□ 0.91
PMS1P54277 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PMS1P54277 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.74■□□□□ 0.91
PMS1P54277 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.74■□□□□ 0.91
PMS1P54277 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PMS1P54277 CKBP1-201ENST00000565489 1086 ntBASIC20.74■□□□□ 0.91
PMS1P54277 MIR6786-201ENST00000616843 113 ntBASIC20.74■□□□□ 0.91
PMS1P54277 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.74■□□□□ 0.91
PMS1P54277 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.74■□□□□ 0.91
PMS1P54277 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.74■□□□□ 0.91
PMS1P54277 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PMS1P54277 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PMS1P54277 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PMS1P54277 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PMS1P54277 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PMS1P54277 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PMS1P54277 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.73■□□□□ 0.91
PMS1P54277 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms