Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.31■□□□□ 0.52
PDX1P52945 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PDX1P52945 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 AC069148.1-201ENST00000608741 768 ntBASIC18.31■□□□□ 0.52
PDX1P52945 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDX1P52945 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.31■□□□□ 0.52
PDX1P52945 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.31■□□□□ 0.52
PDX1P52945 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.31■□□□□ 0.52
PDX1P52945 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.31■□□□□ 0.52
PDX1P52945 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDX1P52945 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
PDX1P52945 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PDX1P52945 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.3■□□□□ 0.52
PDX1P52945 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PDX1P52945 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PDX1P52945 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDX1P52945 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.3■□□□□ 0.52
PDX1P52945 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 STARP1-201ENST00000397973 869 ntBASIC18.3■□□□□ 0.52
PDX1P52945 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.3■□□□□ 0.52
PDX1P52945 SPDYE13P-201ENST00000445314 798 ntBASIC18.3■□□□□ 0.52
PDX1P52945 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.3■□□□□ 0.52
PDX1P52945 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.3■□□□□ 0.52
PDX1P52945 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.3■□□□□ 0.52
PDX1P52945 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PDX1P52945 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.3■□□□□ 0.52
PDX1P52945 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.3■□□□□ 0.52
PDX1P52945 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDX1P52945 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDX1P52945 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDX1P52945 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.29■□□□□ 0.52
PDX1P52945 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.29■□□□□ 0.52
PDX1P52945 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.29■□□□□ 0.52
PDX1P52945 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.29■□□□□ 0.52
PDX1P52945 ZNF444P1-201ENST00000559497 298 ntBASIC18.29■□□□□ 0.52
PDX1P52945 CLEC4GP1-201ENST00000596555 870 ntBASIC18.29■□□□□ 0.52
PDX1P52945 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
PDX1P52945 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PDX1P52945 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.29■□□□□ 0.52
PDX1P52945 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDX1P52945 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.28■□□□□ 0.52
PDX1P52945 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.28■□□□□ 0.52
PDX1P52945 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.28■□□□□ 0.52
PDX1P52945 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.28■□□□□ 0.52
PDX1P52945 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PDX1P52945 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.28■□□□□ 0.52
PDX1P52945 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDX1P52945 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDX1P52945 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDX1P52945 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDX1P52945 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDX1P52945 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDX1P52945 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDX1P52945 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDX1P52945 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDX1P52945 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PDX1P52945 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PDX1P52945 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.27■□□□□ 0.52
PDX1P52945 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDX1P52945 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms