Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLCN4P51793 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN4P51793 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN4P51793 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN4P51793 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN4P51793 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 AL391807.1-203ENST00000604392 2365 ntBASIC19.84■□□□□ 0.77
CLCN4P51793 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN4P51793 MIR662-201ENST00000384847 95 ntBASIC19.84■□□□□ 0.77
CLCN4P51793 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLCN4P51793 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.84■□□□□ 0.77
CLCN4P51793 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CLCN4P51793 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.84■□□□□ 0.77
CLCN4P51793 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN4P51793 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN4P51793 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN4P51793 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCN4P51793 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN4P51793 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCN4P51793 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN4P51793 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLCN4P51793 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLCN4P51793 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.83■□□□□ 0.77
CLCN4P51793 AL845331.1-201ENST00000424978 1190 ntBASIC19.83■□□□□ 0.77
CLCN4P51793 CHCHD2P8-201ENST00000429873 447 ntBASIC19.83■□□□□ 0.77
CLCN4P51793 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN4P51793 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCN4P51793 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CLCN4P51793 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.83■□□□□ 0.77
CLCN4P51793 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.83■□□□□ 0.77
CLCN4P51793 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN4P51793 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCN4P51793 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLCN4P51793 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.83■□□□□ 0.76
CLCN4P51793 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.82■□□□□ 0.76
CLCN4P51793 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN4P51793 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.82■□□□□ 0.76
CLCN4P51793 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLCN4P51793 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN4P51793 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.82■□□□□ 0.76
CLCN4P51793 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.82■□□□□ 0.76
CLCN4P51793 NUS1P1-201ENST00000446295 882 ntBASIC19.82■□□□□ 0.76
CLCN4P51793 UNC93B7-201ENST00000509439 705 ntBASIC19.82■□□□□ 0.76
CLCN4P51793 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.82■□□□□ 0.76
CLCN4P51793 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CLCN4P51793 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLCN4P51793 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.82■□□□□ 0.76
CLCN4P51793 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLCN4P51793 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
CLCN4P51793 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLCN4P51793 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLCN4P51793 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLCN4P51793 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN4P51793 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 AC004870.1-201ENST00000315132 882 ntBASIC19.81■□□□□ 0.76
CLCN4P51793 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN4P51793 FDX1P1-201ENST00000449115 551 ntBASIC19.81■□□□□ 0.76
CLCN4P51793 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.81■□□□□ 0.76
CLCN4P51793 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.81■□□□□ 0.76
CLCN4P51793 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.81■□□□□ 0.76
CLCN4P51793 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.81■□□□□ 0.76
CLCN4P51793 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCN4P51793 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCN4P51793 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN4P51793 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.81■□□□□ 0.76
CLCN4P51793 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
CLCN4P51793 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLCN4P51793 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms