Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 UBE2SP1-201ENST00000450587 669 ntBASIC17.52■□□□□ 0.4
RNF144AP50876 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF144AP50876 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.52■□□□□ 0.4
RNF144AP50876 AC011298.2-201ENST00000617989 482 ntBASIC17.52■□□□□ 0.4
RNF144AP50876 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF144AP50876 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF144AP50876 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF144AP50876 CROCCP3-202ENST00000420820 1947 ntBASIC17.52■□□□□ 0.4
RNF144AP50876 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RNF144AP50876 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNF144AP50876 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF144AP50876 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF144AP50876 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF144AP50876 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF144AP50876 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF144AP50876 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
RNF144AP50876 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF144AP50876 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF144AP50876 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RNF144AP50876 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RNF144AP50876 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF144AP50876 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF144AP50876 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF144AP50876 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 RPS2P55-201ENST00000397318 883 ntBASIC17.51■□□□□ 0.39
RNF144AP50876 FEM1AP3-201ENST00000403722 1741 ntBASIC17.51■□□□□ 0.39
RNF144AP50876 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 AL353807.1-201ENST00000427475 662 ntBASIC17.51■□□□□ 0.39
RNF144AP50876 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF144AP50876 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF144AP50876 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNF144AP50876 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 AC107956.1-201ENST00000494359 873 ntBASIC17.51■□□□□ 0.39
RNF144AP50876 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF144AP50876 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF144AP50876 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF144AP50876 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RNF144AP50876 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF144AP50876 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RNF144AP50876 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 AL353708.3-201ENST00000610272 989 ntBASIC17.51■□□□□ 0.39
RNF144AP50876 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 AC113410.3-201ENST00000623366 203 ntBASIC17.51■□□□□ 0.39
RNF144AP50876 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF144AP50876 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF144AP50876 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF144AP50876 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF144AP50876 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF144AP50876 TSPY7P-201ENST00000431358 1114 ntBASIC17.5■□□□□ 0.39
RNF144AP50876 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF144AP50876 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF144AP50876 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.5■□□□□ 0.39
RNF144AP50876 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF144AP50876 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.5■□□□□ 0.39
RNF144AP50876 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF144AP50876 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF144AP50876 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF144AP50876 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF144AP50876 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF144AP50876 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms