Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLCSP50747 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.04■□□□□ 0.48
HLCSP50747 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLCSP50747 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
HLCSP50747 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.04■□□□□ 0.48
HLCSP50747 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
HLCSP50747 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
HLCSP50747 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.03■□□□□ 0.48
HLCSP50747 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HLCSP50747 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 AL354751.1-201ENST00000412768 1863 ntBASIC18.03■□□□□ 0.48
HLCSP50747 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HLCSP50747 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HLCSP50747 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HLCSP50747 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HLCSP50747 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.03■□□□□ 0.48
HLCSP50747 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.03■□□□□ 0.48
HLCSP50747 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.03■□□□□ 0.48
HLCSP50747 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.03■□□□□ 0.48
HLCSP50747 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 CR392000.1-201ENST00000624770 1228 ntBASIC18.03■□□□□ 0.48
HLCSP50747 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.03■□□□□ 0.48
HLCSP50747 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.03■□□□□ 0.48
HLCSP50747 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLCSP50747 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.03■□□□□ 0.48
HLCSP50747 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
HLCSP50747 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.02■□□□□ 0.48
HLCSP50747 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HLCSP50747 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.02■□□□□ 0.48
HLCSP50747 KRT16P1-201ENST00000399124 1418 ntBASIC18.02■□□□□ 0.48
HLCSP50747 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLCSP50747 TSPY15P-201ENST00000457163 923 ntBASIC18.02■□□□□ 0.48
HLCSP50747 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
HLCSP50747 NUDT16P1-203ENST00000513809 620 ntBASIC18.02■□□□□ 0.48
HLCSP50747 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.02■□□□□ 0.48
HLCSP50747 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.02■□□□□ 0.48
HLCSP50747 AP001271.2-201ENST00000624018 1556 ntBASIC18.02■□□□□ 0.48
HLCSP50747 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HLCSP50747 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HLCSP50747 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLCSP50747 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.02■□□□□ 0.47
HLCSP50747 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.02■□□□□ 0.47
HLCSP50747 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.01■□□□□ 0.47
HLCSP50747 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.01■□□□□ 0.47
HLCSP50747 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HLCSP50747 AC068880.1-201ENST00000507289 2297 ntBASIC18.01■□□□□ 0.47
HLCSP50747 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.01■□□□□ 0.47
HLCSP50747 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HLCSP50747 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HLCSP50747 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.01■□□□□ 0.47
HLCSP50747 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.01■□□□□ 0.47
HLCSP50747 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HLCSP50747 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.01■□□□□ 0.47
HLCSP50747 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HLCSP50747 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 AL161938.1-201ENST00000569833 2180 ntBASIC18.01■□□□□ 0.47
HLCSP50747 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLCSP50747 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18■□□□□ 0.47
HLCSP50747 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HLCSP50747 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18■□□□□ 0.47
HLCSP50747 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18■□□□□ 0.47
HLCSP50747 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18■□□□□ 0.47
HLCSP50747 WIZP1-201ENST00000531444 2299 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms