Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNFP41002 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNFP41002 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNFP41002 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCNFP41002 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
CCNFP41002 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCNFP41002 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCNFP41002 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNFP41002 GCSHP5-201ENST00000443090 522 ntBASIC18.97■□□□□ 0.63
CCNFP41002 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNFP41002 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.97■□□□□ 0.63
CCNFP41002 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCNFP41002 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCNFP41002 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNFP41002 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNFP41002 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CCNFP41002 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNFP41002 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCNFP41002 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNFP41002 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNFP41002 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCNFP41002 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCNFP41002 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCNFP41002 AC098590.1-201ENST00000468126 897 ntBASIC18.96■□□□□ 0.63
CCNFP41002 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNFP41002 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNFP41002 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCNFP41002 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNFP41002 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNFP41002 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CCNFP41002 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 AL133373.2-201ENST00000623187 2828 ntBASIC18.95■□□□□ 0.62
CCNFP41002 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.95■□□□□ 0.62
CCNFP41002 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCNFP41002 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNFP41002 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNFP41002 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.95■□□□□ 0.62
CCNFP41002 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.95■□□□□ 0.62
CCNFP41002 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNFP41002 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCNFP41002 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNFP41002 AC073592.3-201ENST00000625118 1834 ntBASIC18.95■□□□□ 0.62
CCNFP41002 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNFP41002 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.95■□□□□ 0.62
CCNFP41002 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.95■□□□□ 0.62
CCNFP41002 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCNFP41002 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCNFP41002 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNFP41002 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNFP41002 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms