Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP8P40818 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.53■□□□□ 0.88
USP8P40818 AC093503.3-201ENST00000624917 2352 ntBASIC20.52■□□□□ 0.88
USP8P40818 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.52■□□□□ 0.88
USP8P40818 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.52■□□□□ 0.88
USP8P40818 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 PRORSD1P-201ENST00000295112 541 ntBASIC20.52■□□□□ 0.88
USP8P40818 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.52■□□□□ 0.88
USP8P40818 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
USP8P40818 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.52■□□□□ 0.88
USP8P40818 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
USP8P40818 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.52■□□□□ 0.88
USP8P40818 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.52■□□□□ 0.88
USP8P40818 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.52■□□□□ 0.88
USP8P40818 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
USP8P40818 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP8P40818 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.52■□□□□ 0.88
USP8P40818 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
USP8P40818 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.52■□□□□ 0.88
USP8P40818 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP8P40818 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
USP8P40818 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP8P40818 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
USP8P40818 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.51■□□□□ 0.87
USP8P40818 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.51■□□□□ 0.87
USP8P40818 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 AL158047.1-201ENST00000445918 881 ntBASIC20.51■□□□□ 0.87
USP8P40818 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.51■□□□□ 0.87
USP8P40818 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 RPS2P4-201ENST00000476944 856 ntBASIC20.51■□□□□ 0.87
USP8P40818 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.51■□□□□ 0.87
USP8P40818 AC142381.4-202ENST00000563973 229 ntBASIC20.51■□□□□ 0.87
USP8P40818 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.51■□□□□ 0.87
USP8P40818 AC131212.4-201ENST00000623606 975 ntBASIC20.51■□□□□ 0.87
USP8P40818 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.51■□□□□ 0.87
USP8P40818 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.51■□□□□ 0.87
USP8P40818 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP8P40818 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
USP8P40818 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP8P40818 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP8P40818 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP8P40818 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP8P40818 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
USP8P40818 NIFKP9-201ENST00000419265 221 ntBASIC20.5■□□□□ 0.87
USP8P40818 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
USP8P40818 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.5■□□□□ 0.87
USP8P40818 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.5■□□□□ 0.87
USP8P40818 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
USP8P40818 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
USP8P40818 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
USP8P40818 AC006333.2-201ENST00000607957 2099 ntBASIC20.5■□□□□ 0.87
USP8P40818 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP8P40818 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
USP8P40818 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP8P40818 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.5■□□□□ 0.87
USP8P40818 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP8P40818 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
USP8P40818 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.49■□□□□ 0.87
USP8P40818 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms