Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SCNN1AP37088 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.61■□□□□ 0.73
SCNN1AP37088 FAM87A-204ENST00000613235 858 ntBASIC19.61■□□□□ 0.73
SCNN1AP37088 AC073912.3-201ENST00000624414 853 ntBASIC19.61■□□□□ 0.73
SCNN1AP37088 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.61■□□□□ 0.73
SCNN1AP37088 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.61■□□□□ 0.73
SCNN1AP37088 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SCNN1AP37088 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCNN1AP37088 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.6■□□□□ 0.73
SCNN1AP37088 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.6■□□□□ 0.73
SCNN1AP37088 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 INGX-201ENST00000359239 846 ntBASIC19.6■□□□□ 0.73
SCNN1AP37088 HMGA1P5-201ENST00000412453 271 ntBASIC19.6■□□□□ 0.73
SCNN1AP37088 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.6■□□□□ 0.73
SCNN1AP37088 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.6■□□□□ 0.73
SCNN1AP37088 AL512604.3-201ENST00000569583 964 ntBASIC19.6■□□□□ 0.73
SCNN1AP37088 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.6■□□□□ 0.73
SCNN1AP37088 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
SCNN1AP37088 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCNN1AP37088 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.6■□□□□ 0.73
SCNN1AP37088 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SCNN1AP37088 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SCNN1AP37088 AC112777.1-201ENST00000540175 1423 ntBASIC19.59■□□□□ 0.73
SCNN1AP37088 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 LINC01568-207ENST00000641790 1380 ntBASIC19.59■□□□□ 0.73
SCNN1AP37088 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 KRT18P22-201ENST00000402024 1347 ntBASIC19.59■□□□□ 0.73
SCNN1AP37088 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.59■□□□□ 0.73
SCNN1AP37088 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.59■□□□□ 0.73
SCNN1AP37088 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.59■□□□□ 0.73
SCNN1AP37088 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.59■□□□□ 0.73
SCNN1AP37088 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SCNN1AP37088 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
SCNN1AP37088 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SCNN1AP37088 CR769767.2-201ENST00000622735 460 ntBASIC19.59■□□□□ 0.73
SCNN1AP37088 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SCNN1AP37088 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SCNN1AP37088 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
SCNN1AP37088 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 KRT8P7-201ENST00000533003 1432 ntBASIC19.59■□□□□ 0.73
SCNN1AP37088 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCNN1AP37088 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SCNN1AP37088 AC034236.2-201ENST00000606662 1610 ntBASIC19.58■□□□□ 0.73
SCNN1AP37088 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCNN1AP37088 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.58■□□□□ 0.73
SCNN1AP37088 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SCNN1AP37088 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SCNN1AP37088 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.58■□□□□ 0.72
SCNN1AP37088 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.58■□□□□ 0.72
SCNN1AP37088 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.58■□□□□ 0.72
SCNN1AP37088 AC012306.2-201ENST00000609350 630 ntBASIC19.58■□□□□ 0.72
SCNN1AP37088 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.58■□□□□ 0.72
SCNN1AP37088 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SCNN1AP37088 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
SCNN1AP37088 HOXB1-202ENST00000577092 1414 ntBASIC19.58■□□□□ 0.72
SCNN1AP37088 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.58■□□□□ 0.72
SCNN1AP37088 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCNN1AP37088 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SCNN1AP37088 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
SCNN1AP37088 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCNN1AP37088 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCNN1AP37088 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
SCNN1AP37088 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.57■□□□□ 0.72
SCNN1AP37088 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
SCNN1AP37088 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms