Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.62■□□□□ 0.57
BCKDHBP21953 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.62■□□□□ 0.57
BCKDHBP21953 AC074051.2-201ENST00000565115 352 ntBASIC18.62■□□□□ 0.57
BCKDHBP21953 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.62■□□□□ 0.57
BCKDHBP21953 GPALPP1-207ENST00000611650 899 ntBASIC18.62■□□□□ 0.57
BCKDHBP21953 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.62■□□□□ 0.57
BCKDHBP21953 LINC00167-201ENST00000530583 1419 ntBASIC18.62■□□□□ 0.57
BCKDHBP21953 RCC2P3-201ENST00000418112 1537 ntBASIC18.62■□□□□ 0.57
BCKDHBP21953 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BCKDHBP21953 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BCKDHBP21953 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 AC008556.1-201ENST00000610908 2040 ntBASIC18.62■□□□□ 0.57
BCKDHBP21953 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.62■□□□□ 0.57
BCKDHBP21953 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BCKDHBP21953 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BCKDHBP21953 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BCKDHBP21953 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
BCKDHBP21953 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.61■□□□□ 0.57
BCKDHBP21953 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.61■□□□□ 0.57
BCKDHBP21953 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
BCKDHBP21953 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.61■□□□□ 0.57
BCKDHBP21953 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
BCKDHBP21953 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.61■□□□□ 0.57
BCKDHBP21953 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.61■□□□□ 0.57
BCKDHBP21953 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.61■□□□□ 0.57
BCKDHBP21953 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
BCKDHBP21953 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.61■□□□□ 0.57
BCKDHBP21953 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BCKDHBP21953 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BCKDHBP21953 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BCKDHBP21953 MRPL3P1-201ENST00000400109 1033 ntBASIC18.6■□□□□ 0.57
BCKDHBP21953 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
BCKDHBP21953 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 KRT16P4-201ENST00000453883 522 ntBASIC18.6■□□□□ 0.57
BCKDHBP21953 AP003733.1-201ENST00000491725 852 ntBASIC18.6■□□□□ 0.57
BCKDHBP21953 AC104390.1-201ENST00000555663 520 ntBASIC18.6■□□□□ 0.57
BCKDHBP21953 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.6■□□□□ 0.57
BCKDHBP21953 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.6■□□□□ 0.57
BCKDHBP21953 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.6■□□□□ 0.57
BCKDHBP21953 AL390719.2-201ENST00000606993 987 ntBASIC18.6■□□□□ 0.57
BCKDHBP21953 AC006538.3-201ENST00000612495 578 ntBASIC18.6■□□□□ 0.57
BCKDHBP21953 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.6■□□□□ 0.57
BCKDHBP21953 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BCKDHBP21953 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.6■□□□□ 0.57
BCKDHBP21953 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.6■□□□□ 0.57
BCKDHBP21953 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.6■□□□□ 0.57
BCKDHBP21953 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BCKDHBP21953 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BCKDHBP21953 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BCKDHBP21953 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.6■□□□□ 0.57
BCKDHBP21953 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.6■□□□□ 0.57
BCKDHBP21953 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms