Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ATF7P17544 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATF7P17544 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.67■□□□□ 0.9
ATF7P17544 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.67■□□□□ 0.9
ATF7P17544 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 FAM86EP-206ENST00000510506 987 ntBASIC20.67■□□□□ 0.9
ATF7P17544 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.67■□□□□ 0.9
ATF7P17544 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.67■□□□□ 0.9
ATF7P17544 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.67■□□□□ 0.9
ATF7P17544 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.67■□□□□ 0.9
ATF7P17544 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.67■□□□□ 0.9
ATF7P17544 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATF7P17544 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF7P17544 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF7P17544 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF7P17544 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.66■□□□□ 0.9
ATF7P17544 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATF7P17544 KRT18P48-201ENST00000434763 852 ntBASIC20.66■□□□□ 0.9
ATF7P17544 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF7P17544 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.66■□□□□ 0.9
ATF7P17544 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF7P17544 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ATF7P17544 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATF7P17544 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ATF7P17544 AL121894.2-201ENST00000602977 491 ntBASIC20.66■□□□□ 0.9
ATF7P17544 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF7P17544 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.66■□□□□ 0.9
ATF7P17544 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.66■□□□□ 0.9
ATF7P17544 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATF7P17544 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATF7P17544 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF7P17544 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATF7P17544 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATF7P17544 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF7P17544 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF7P17544 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF7P17544 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF7P17544 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.65■□□□□ 0.9
ATF7P17544 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF7P17544 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATF7P17544 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.65■□□□□ 0.9
ATF7P17544 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.65■□□□□ 0.9
ATF7P17544 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.65■□□□□ 0.9
ATF7P17544 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.65■□□□□ 0.9
ATF7P17544 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.65■□□□□ 0.9
ATF7P17544 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.65■□□□□ 0.9
ATF7P17544 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.65■□□□□ 0.9
ATF7P17544 AC140113.3-201ENST00000605663 199 ntBASIC20.65■□□□□ 0.9
ATF7P17544 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.65■□□□□ 0.9
ATF7P17544 AL121956.5-201ENST00000625261 221 ntBASIC20.65■□□□□ 0.9
ATF7P17544 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.65■□□□□ 0.9
ATF7P17544 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATF7P17544 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF7P17544 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.65■□□□□ 0.9
ATF7P17544 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.65■□□□□ 0.9
ATF7P17544 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF7P17544 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.64■□□□□ 0.9
ATF7P17544 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.64■□□□□ 0.9
ATF7P17544 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF7P17544 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF7P17544 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF7P17544 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.64■□□□□ 0.9
ATF7P17544 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ATF7P17544 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
ATF7P17544 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.64■□□□□ 0.89
ATF7P17544 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
ATF7P17544 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ATF7P17544 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.64■□□□□ 0.89
ATF7P17544 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.64■□□□□ 0.89
ATF7P17544 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.64■□□□□ 0.89
ATF7P17544 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ATF7P17544 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATF7P17544 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATF7P17544 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ATF7P17544 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms