Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.83■□□□□ 0.44
NCK1P16333 AF201337.1-201ENST00000520239 748 ntBASIC17.83■□□□□ 0.44
NCK1P16333 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.83■□□□□ 0.44
NCK1P16333 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.83■□□□□ 0.44
NCK1P16333 AL050303.2-201ENST00000619798 666 ntBASIC17.83■□□□□ 0.44
NCK1P16333 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.83■□□□□ 0.44
NCK1P16333 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NCK1P16333 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
NCK1P16333 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NCK1P16333 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.83■□□□□ 0.44
NCK1P16333 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NCK1P16333 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NCK1P16333 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.82■□□□□ 0.44
NCK1P16333 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.82■□□□□ 0.44
NCK1P16333 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.82■□□□□ 0.44
NCK1P16333 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.82■□□□□ 0.44
NCK1P16333 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.82■□□□□ 0.44
NCK1P16333 TUBB8P6-201ENST00000436895 1288 ntBASIC17.82■□□□□ 0.44
NCK1P16333 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.82■□□□□ 0.44
NCK1P16333 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.82■□□□□ 0.44
NCK1P16333 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NCK1P16333 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.82■□□□□ 0.44
NCK1P16333 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NCK1P16333 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.82■□□□□ 0.44
NCK1P16333 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
NCK1P16333 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.82■□□□□ 0.44
NCK1P16333 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NCK1P16333 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NCK1P16333 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.81■□□□□ 0.44
NCK1P16333 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NCK1P16333 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NCK1P16333 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NCK1P16333 DUSP5P2-201ENST00000426873 1033 ntBASIC17.81■□□□□ 0.44
NCK1P16333 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
NCK1P16333 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 RAP2CP1-201ENST00000605103 478 ntBASIC17.81■□□□□ 0.44
NCK1P16333 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
NCK1P16333 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.81■□□□□ 0.44
NCK1P16333 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NCK1P16333 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.81■□□□□ 0.44
NCK1P16333 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 AC008764.6-201ENST00000595909 2069 ntBASIC17.81■□□□□ 0.44
NCK1P16333 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCK1P16333 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NCK1P16333 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.8■□□□□ 0.44
NCK1P16333 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.8■□□□□ 0.44
NCK1P16333 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.8■□□□□ 0.44
NCK1P16333 AL499627.1-201ENST00000569373 2188 ntBASIC17.8■□□□□ 0.44
NCK1P16333 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NCK1P16333 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.8■□□□□ 0.44
NCK1P16333 AC012313.1-201ENST00000593393 3059 ntBASIC17.8■□□□□ 0.44
NCK1P16333 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.8■□□□□ 0.44
NCK1P16333 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCK1P16333 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms