Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AP000997.3-201ENST00000623333 2250 ntBASIC16.56■□□□□ 0.24
UBCP0CG48 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.55■□□□□ 0.24
UBCP0CG48 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.55■□□□□ 0.24
UBCP0CG48 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 NBPF21P-201ENST00000425093 1451 ntBASIC16.55■□□□□ 0.24
UBCP0CG48 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.55■□□□□ 0.24
UBCP0CG48 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBCP0CG48 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 MIR935-201ENST00000401179 91 ntBASIC16.55■□□□□ 0.24
UBCP0CG48 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.55■□□□□ 0.24
UBCP0CG48 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBCP0CG48 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.55■□□□□ 0.24
UBCP0CG48 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
UBCP0CG48 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.55■□□□□ 0.24
UBCP0CG48 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
UBCP0CG48 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
UBCP0CG48 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
UBCP0CG48 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.55■□□□□ 0.24
UBCP0CG48 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
UBCP0CG48 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBCP0CG48 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 NOC2LP1-202ENST00000452600 2235 ntBASIC16.54■□□□□ 0.24
UBCP0CG48 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.54■□□□□ 0.24
UBCP0CG48 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.54■□□□□ 0.24
UBCP0CG48 TSPY23P-201ENST00000440136 739 ntBASIC16.54■□□□□ 0.24
UBCP0CG48 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.54■□□□□ 0.24
UBCP0CG48 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UBCP0CG48 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 HLA-A-209ENST00000638375 975 ntBASIC16.54■□□□□ 0.24
UBCP0CG48 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.54■□□□□ 0.24
UBCP0CG48 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.54■□□□□ 0.24
UBCP0CG48 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.54■□□□□ 0.24
UBCP0CG48 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.54■□□□□ 0.24
UBCP0CG48 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.54■□□□□ 0.24
UBCP0CG48 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBCP0CG48 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.53■□□□□ 0.24
UBCP0CG48 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBCP0CG48 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBCP0CG48 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBCP0CG48 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBCP0CG48 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.53■□□□□ 0.24
UBCP0CG48 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.53■□□□□ 0.24
UBCP0CG48 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.53■□□□□ 0.24
UBCP0CG48 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.53■□□□□ 0.24
UBCP0CG48 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.53■□□□□ 0.24
UBCP0CG48 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBCP0CG48 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 BICD1-207ENST00000551848 1962 ntBASIC16.53■□□□□ 0.24
UBCP0CG48 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 FZD10-202ENST00000539839 3282 ntBASIC16.53■□□□□ 0.24
UBCP0CG48 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBCP0CG48 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
UBCP0CG48 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBCP0CG48 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.52■□□□□ 0.24
UBCP0CG48 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBCP0CG48 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBCP0CG48 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms