Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.31■■□□□ 1
HOXC6P09630 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.31■■□□□ 1
HOXC6P09630 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
HOXC6P09630 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.31■■□□□ 1
HOXC6P09630 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.31■■□□□ 1
HOXC6P09630 AL160237.2-201ENST00000556165 472 ntBASIC21.31■■□□□ 1
HOXC6P09630 AC091304.2-201ENST00000564639 760 ntBASIC21.31■■□□□ 1
HOXC6P09630 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.31■■□□□ 1
HOXC6P09630 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.31■■□□□ 1
HOXC6P09630 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HOXC6P09630 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.31■■□□□ 1
HOXC6P09630 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.3■■□□□ 1
HOXC6P09630 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.3■■□□□ 1
HOXC6P09630 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.3■■□□□ 1
HOXC6P09630 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.3■■□□□ 1
HOXC6P09630 LINC00265-3P-201ENST00000447588 903 ntBASIC21.3■■□□□ 1
HOXC6P09630 AP000867.3-201ENST00000524675 377 ntBASIC21.3■■□□□ 1
HOXC6P09630 AC104390.1-201ENST00000555663 520 ntBASIC21.3■■□□□ 1
HOXC6P09630 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.3■■□□□ 1
HOXC6P09630 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.3■■□□□ 1
HOXC6P09630 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HOXC6P09630 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.29■■□□□ 1
HOXC6P09630 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.29■■□□□ 1
HOXC6P09630 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.29■■□□□ 1
HOXC6P09630 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HOXC6P09630 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.29■■□□□ 1
HOXC6P09630 TOB2P1-201ENST00000469761 992 ntBASIC21.29■■□□□ 1
HOXC6P09630 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.29■■□□□ 1
HOXC6P09630 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.29■■□□□ 1
HOXC6P09630 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
HOXC6P09630 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.29■■□□□ 1
HOXC6P09630 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.29■■□□□ 1
HOXC6P09630 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HOXC6P09630 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.28■■□□□ 1
HOXC6P09630 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.28■■□□□ 1
HOXC6P09630 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.28■■□□□ 1
HOXC6P09630 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
HOXC6P09630 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.28■■□□□ 1
HOXC6P09630 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HOXC6P09630 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.28■■□□□ 1
HOXC6P09630 KRT18P31-201ENST00000506277 1292 ntBASIC21.28■■□□□ 1
HOXC6P09630 AC106795.1-205ENST00000512851 1056 ntBASIC21.28■■□□□ 1
HOXC6P09630 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.28■■□□□ 1
HOXC6P09630 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
HOXC6P09630 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HOXC6P09630 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
HOXC6P09630 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 PKD1P6-201ENST00000343738 4769 ntBASIC21.28■■□□□ 1
HOXC6P09630 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.28■■□□□ 1
HOXC6P09630 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
HOXC6P09630 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.27■■□□□ 1
HOXC6P09630 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HOXC6P09630 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC6P09630 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HOXC6P09630 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.27■■□□□ 1
HOXC6P09630 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms