Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GYPBP06028 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
GYPBP06028 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.96■□□□□ 0.3
GYPBP06028 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GYPBP06028 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
GYPBP06028 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.96■□□□□ 0.3
GYPBP06028 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.95■□□□□ 0.3
GYPBP06028 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.95■□□□□ 0.3
GYPBP06028 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GYPBP06028 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.95■□□□□ 0.3
GYPBP06028 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.95■□□□□ 0.3
GYPBP06028 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.95■□□□□ 0.3
GYPBP06028 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 AL355802.2-201ENST00000402069 882 ntBASIC16.95■□□□□ 0.3
GYPBP06028 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
GYPBP06028 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 TSPY21P-201ENST00000433481 731 ntBASIC16.95■□□□□ 0.3
GYPBP06028 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.95■□□□□ 0.3
GYPBP06028 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.95■□□□□ 0.3
GYPBP06028 C1QL1P1-201ENST00000568105 661 ntBASIC16.95■□□□□ 0.3
GYPBP06028 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GYPBP06028 AC008403.3-201ENST00000598924 454 ntBASIC16.95■□□□□ 0.3
GYPBP06028 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.95■□□□□ 0.3
GYPBP06028 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GYPBP06028 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.95■□□□□ 0.3
GYPBP06028 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GYPBP06028 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 AC126763.1-201ENST00000552015 2118 ntBASIC16.94■□□□□ 0.3
GYPBP06028 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.94■□□□□ 0.3
GYPBP06028 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.94■□□□□ 0.3
GYPBP06028 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.94■□□□□ 0.3
GYPBP06028 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.94■□□□□ 0.3
GYPBP06028 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GYPBP06028 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GYPBP06028 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
GYPBP06028 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.94■□□□□ 0.3
GYPBP06028 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
GYPBP06028 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
GYPBP06028 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GYPBP06028 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 AL354751.1-201ENST00000412768 1863 ntBASIC16.93■□□□□ 0.3
GYPBP06028 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.93■□□□□ 0.3
GYPBP06028 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.93■□□□□ 0.3
GYPBP06028 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.93■□□□□ 0.3
GYPBP06028 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 AC090192.1-201ENST00000517740 490 ntBASIC16.93■□□□□ 0.3
GYPBP06028 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 LETM1P2-201ENST00000597330 2178 ntBASIC16.93■□□□□ 0.3
GYPBP06028 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.93■□□□□ 0.3
GYPBP06028 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.93■□□□□ 0.3
GYPBP06028 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
GYPBP06028 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GYPBP06028 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.93■□□□□ 0.3
GYPBP06028 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.93■□□□□ 0.3
GYPBP06028 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms