Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.77□□□□□ -0.53
APOBP04114 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.77□□□□□ -0.53
APOBP04114 AC010327.4-202ENST00000591484 748 ntBASIC11.77□□□□□ -0.53
APOBP04114 AC005336.2-201ENST00000593183 939 ntBASIC11.77□□□□□ -0.53
APOBP04114 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC11.77□□□□□ -0.53
APOBP04114 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.77□□□□□ -0.53
APOBP04114 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 AL512353.2-201ENST00000448759 1962 ntBASIC11.76□□□□□ -0.53
APOBP04114 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
APOBP04114 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC11.76□□□□□ -0.53
APOBP04114 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.76□□□□□ -0.53
APOBP04114 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.76□□□□□ -0.53
APOBP04114 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.76□□□□□ -0.53
APOBP04114 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 GAS2L1P1-201ENST00000420145 1480 ntBASIC11.76□□□□□ -0.53
APOBP04114 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
APOBP04114 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC11.76□□□□□ -0.53
APOBP04114 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.76□□□□□ -0.53
APOBP04114 AC098831.1-202ENST00000438821 336 ntBASIC11.76□□□□□ -0.53
APOBP04114 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
APOBP04114 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
APOBP04114 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.76□□□□□ -0.53
APOBP04114 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
APOBP04114 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.76□□□□□ -0.53
APOBP04114 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
APOBP04114 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 IGHGP-201ENST00000390555 1178 ntBASIC11.76□□□□□ -0.53
APOBP04114 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOBP04114 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC11.75□□□□□ -0.53
APOBP04114 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.75□□□□□ -0.53
APOBP04114 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 AC073648.2-201ENST00000510116 352 ntBASIC11.75□□□□□ -0.53
APOBP04114 AC090616.6-201ENST00000582640 721 ntBASIC11.75□□□□□ -0.53
APOBP04114 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.75□□□□□ -0.53
APOBP04114 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC11.75□□□□□ -0.53
APOBP04114 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.75□□□□□ -0.53
APOBP04114 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
APOBP04114 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC11.75□□□□□ -0.53
APOBP04114 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.75□□□□□ -0.53
APOBP04114 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
APOBP04114 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC11.75□□□□□ -0.53
APOBP04114 AC073314.1-201ENST00000568729 2216 ntBASIC11.75□□□□□ -0.53
APOBP04114 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC11.75□□□□□ -0.53
APOBP04114 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC11.75□□□□□ -0.53
APOBP04114 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOBP04114 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
APOBP04114 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 SART3-203ENST00000546611 1184 ntBASIC11.74□□□□□ -0.53
APOBP04114 AC008608.2-201ENST00000606089 416 ntBASIC11.74□□□□□ -0.53
APOBP04114 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.74□□□□□ -0.53
APOBP04114 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
APOBP04114 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOBP04114 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.74□□□□□ -0.53
APOBP04114 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms