Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRBC1P01850 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TRBC1P01850 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBC1P01850 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBC1P01850 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBC1P01850 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBC1P01850 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBC1P01850 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBC1P01850 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBC1P01850 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRBC1P01850 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBC1P01850 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRBC1P01850 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRBC1P01850 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBC1P01850 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBC1P01850 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBC1P01850 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRBC1P01850 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBC1P01850 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRBC1P01850 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBC1P01850 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRBC1P01850 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 RCC2P3-201ENST00000418112 1537 ntBASIC18.89■□□□□ 0.61
TRBC1P01850 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBC1P01850 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBC1P01850 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBC1P01850 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBC1P01850 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRBC1P01850 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRBC1P01850 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRBC1P01850 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRBC1P01850 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBC1P01850 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.88■□□□□ 0.61
TRBC1P01850 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRBC1P01850 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRBC1P01850 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 AC006333.2-201ENST00000607957 2099 ntBASIC18.88■□□□□ 0.61
TRBC1P01850 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRBC1P01850 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRBC1P01850 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBC1P01850 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBC1P01850 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBC1P01850 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBC1P01850 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBC1P01850 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBC1P01850 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBC1P01850 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBC1P01850 AC113347.1-201ENST00000413321 391 ntBASIC18.87■□□□□ 0.61
TRBC1P01850 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRBC1P01850 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.87■□□□□ 0.61
TRBC1P01850 AC005363.2-201ENST00000618631 242 ntBASIC18.87■□□□□ 0.61
TRBC1P01850 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRBC1P01850 AC083906.6-201ENST00000641366 219 ntBASIC18.87■□□□□ 0.61
TRBC1P01850 AC068587.9-201ENST00000641814 219 ntBASIC18.87■□□□□ 0.61
TRBC1P01850 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBC1P01850 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRBC1P01850 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
TRBC1P01850 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBC1P01850 AL109659.2-201ENST00000606809 1674 ntBASIC18.86■□□□□ 0.61
TRBC1P01850 HEIH-201ENST00000623091 1652 ntBASIC18.86■□□□□ 0.61
TRBC1P01850 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBC1P01850 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.86■□□□□ 0.61
TRBC1P01850 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBC1P01850 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBC1P01850 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRBC1P01850 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBC1P01850 MCCD1P1-208ENST00000445732 328 ntBASIC18.86■□□□□ 0.61
TRBC1P01850 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBC1P01850 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBC1P01850 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
TRBC1P01850 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms