Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.79■□□□□ 0.6
CBX6O95503 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX6O95503 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX6O95503 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.79■□□□□ 0.6
CBX6O95503 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CBX6O95503 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CBX6O95503 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CBX6O95503 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX6O95503 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CBX6O95503 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CBX6O95503 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CBX6O95503 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX6O95503 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CBX6O95503 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.78■□□□□ 0.6
CBX6O95503 KRT17P3-201ENST00000420566 1262 ntBASIC18.78■□□□□ 0.6
CBX6O95503 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.78■□□□□ 0.6
CBX6O95503 CYP2T3P-201ENST00000601990 817 ntBASIC18.78■□□□□ 0.6
CBX6O95503 Z99916.2-201ENST00000604037 246 ntBASIC18.78■□□□□ 0.6
CBX6O95503 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CBX6O95503 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.78■□□□□ 0.6
CBX6O95503 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CBX6O95503 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CBX6O95503 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CBX6O95503 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CBX6O95503 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 RN7SL471P-201ENST00000580476 299 ntBASIC18.77■□□□□ 0.6
CBX6O95503 REXO1L12P-201ENST00000622156 912 ntBASIC18.77■□□□□ 0.6
CBX6O95503 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBX6O95503 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CBX6O95503 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CBX6O95503 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.77■□□□□ 0.6
CBX6O95503 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CBX6O95503 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CBX6O95503 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CBX6O95503 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBX6O95503 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CBX6O95503 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBX6O95503 AC099398.1-201ENST00000567919 2776 ntBASIC18.76■□□□□ 0.59
CBX6O95503 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX6O95503 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX6O95503 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX6O95503 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CBX6O95503 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CBX6O95503 AC211429.1-201ENST00000415277 523 ntBASIC18.76■□□□□ 0.59
CBX6O95503 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX6O95503 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX6O95503 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.76■□□□□ 0.59
CBX6O95503 PNMA6B-201ENST00000538162 1200 ntBASIC18.76■□□□□ 0.59
CBX6O95503 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.76■□□□□ 0.59
CBX6O95503 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.76■□□□□ 0.59
CBX6O95503 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CBX6O95503 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CBX6O95503 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBX6O95503 AC090340.1-201ENST00000620778 4980 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms