Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UPK1BO75841 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 AC097381.1-201ENST00000429019 1296 ntBASIC16.46■□□□□ 0.23
UPK1BO75841 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 IGHV3-19-201ENST00000521488 291 ntBASIC16.46■□□□□ 0.23
UPK1BO75841 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
UPK1BO75841 AL356309.3-201ENST00000624132 1934 ntBASIC16.46■□□□□ 0.23
UPK1BO75841 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
UPK1BO75841 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1BO75841 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK1BO75841 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK1BO75841 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1BO75841 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
UPK1BO75841 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UPK1BO75841 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UPK1BO75841 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UPK1BO75841 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
UPK1BO75841 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.45■□□□□ 0.22
UPK1BO75841 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 AL513477.1-201ENST00000602865 2407 ntBASIC16.45■□□□□ 0.22
UPK1BO75841 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.45■□□□□ 0.22
UPK1BO75841 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 AC105265.2-201ENST00000467189 838 ntBASIC16.45■□□□□ 0.22
UPK1BO75841 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
UPK1BO75841 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UPK1BO75841 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1BO75841 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
UPK1BO75841 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.45■□□□□ 0.22
UPK1BO75841 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.45■□□□□ 0.22
UPK1BO75841 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1BO75841 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.45■□□□□ 0.22
UPK1BO75841 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 PCDH8P1-201ENST00000428983 2773 ntBASIC16.44■□□□□ 0.22
UPK1BO75841 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.44■□□□□ 0.22
UPK1BO75841 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
UPK1BO75841 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UPK1BO75841 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
UPK1BO75841 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.44■□□□□ 0.22
UPK1BO75841 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.44■□□□□ 0.22
UPK1BO75841 AC243732.1-201ENST00000612648 864 ntBASIC16.44■□□□□ 0.22
UPK1BO75841 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UPK1BO75841 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UPK1BO75841 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.44■□□□□ 0.22
UPK1BO75841 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 UBALD1-205ENST00000590891 2641 ntBASIC16.44■□□□□ 0.22
UPK1BO75841 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
UPK1BO75841 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.44■□□□□ 0.22
UPK1BO75841 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms