Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PFDN1O60925 FLJ16779-201ENST00000612722 7638 ntBASIC16.92■□□□□ 0.3
PFDN1O60925 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.92■□□□□ 0.3
PFDN1O60925 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.92■□□□□ 0.3
PFDN1O60925 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
PFDN1O60925 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.92■□□□□ 0.3
PFDN1O60925 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.92■□□□□ 0.3
PFDN1O60925 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PFDN1O60925 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PFDN1O60925 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.91■□□□□ 0.3
PFDN1O60925 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PFDN1O60925 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PFDN1O60925 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PFDN1O60925 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.91■□□□□ 0.3
PFDN1O60925 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PFDN1O60925 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 AL162741.1-201ENST00000565563 1558 ntBASIC16.91■□□□□ 0.3
PFDN1O60925 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PFDN1O60925 RPS2P35-201ENST00000443417 897 ntBASIC16.91■□□□□ 0.3
PFDN1O60925 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.91■□□□□ 0.3
PFDN1O60925 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.91■□□□□ 0.3
PFDN1O60925 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PFDN1O60925 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.91■□□□□ 0.3
PFDN1O60925 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.91■□□□□ 0.3
PFDN1O60925 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PFDN1O60925 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.91■□□□□ 0.3
PFDN1O60925 LINC02199-201ENST00000506655 2702 ntBASIC16.9■□□□□ 0.3
PFDN1O60925 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.9■□□□□ 0.3
PFDN1O60925 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.9■□□□□ 0.3
PFDN1O60925 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PFDN1O60925 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PFDN1O60925 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.9■□□□□ 0.3
PFDN1O60925 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PFDN1O60925 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PFDN1O60925 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PFDN1O60925 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PFDN1O60925 AC023824.1-201ENST00000562945 2975 ntBASIC16.89■□□□□ 0.3
PFDN1O60925 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.89■□□□□ 0.29
PFDN1O60925 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 DPP3P2-201ENST00000416030 1696 ntBASIC16.89■□□□□ 0.29
PFDN1O60925 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.89■□□□□ 0.29
PFDN1O60925 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 SPCS2P3-201ENST00000500401 656 ntBASIC16.89■□□□□ 0.29
PFDN1O60925 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.89■□□□□ 0.29
PFDN1O60925 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.89■□□□□ 0.29
PFDN1O60925 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.89■□□□□ 0.29
PFDN1O60925 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.89■□□□□ 0.29
PFDN1O60925 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
PFDN1O60925 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.89■□□□□ 0.29
PFDN1O60925 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.89■□□□□ 0.29
PFDN1O60925 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PFDN1O60925 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PFDN1O60925 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms