Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC083880.1-201ENST00000608266 535 ntBASIC18.59■□□□□ 0.57
TRIM13O60858 HLA-A-209ENST00000638375 975 ntBASIC18.59■□□□□ 0.57
TRIM13O60858 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM13O60858 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM13O60858 AC068880.1-201ENST00000507289 2297 ntBASIC18.59■□□□□ 0.57
TRIM13O60858 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM13O60858 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM13O60858 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM13O60858 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM13O60858 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRIM13O60858 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM13O60858 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM13O60858 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM13O60858 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM13O60858 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
TRIM13O60858 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM13O60858 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM13O60858 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
TRIM13O60858 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRIM13O60858 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM13O60858 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM13O60858 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM13O60858 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
TRIM13O60858 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIM13O60858 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRIM13O60858 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM13O60858 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM13O60858 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRIM13O60858 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM13O60858 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM13O60858 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRIM13O60858 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM13O60858 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRIM13O60858 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIM13O60858 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM13O60858 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM13O60858 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 AL162741.1-201ENST00000565563 1558 ntBASIC18.57■□□□□ 0.56
TRIM13O60858 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM13O60858 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TRIM13O60858 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM13O60858 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM13O60858 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM13O60858 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM13O60858 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.57■□□□□ 0.56
TRIM13O60858 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM13O60858 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.57■□□□□ 0.56
TRIM13O60858 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM13O60858 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM13O60858 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM13O60858 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRIM13O60858 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM13O60858 HEIH-201ENST00000623091 1652 ntBASIC18.57■□□□□ 0.56
TRIM13O60858 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRIM13O60858 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TRIM13O60858 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM13O60858 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 BCL2-203ENST00000589955 5011 ntBASIC18.56■□□□□ 0.56
TRIM13O60858 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRIM13O60858 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.56■□□□□ 0.56
TRIM13O60858 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRIM13O60858 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM13O60858 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM13O60858 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms