Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.79■□□□□ 0.44
PLOD3O60568 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PLOD3O60568 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.79■□□□□ 0.44
PLOD3O60568 B3GAT3P1-201ENST00000471720 806 ntBASIC17.79■□□□□ 0.44
PLOD3O60568 AC011506.1-201ENST00000474329 610 ntBASIC17.79■□□□□ 0.44
PLOD3O60568 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.79■□□□□ 0.44
PLOD3O60568 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.79■□□□□ 0.44
PLOD3O60568 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.79■□□□□ 0.44
PLOD3O60568 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.79■□□□□ 0.44
PLOD3O60568 Z99916.2-201ENST00000604037 246 ntBASIC17.79■□□□□ 0.44
PLOD3O60568 AC011298.2-201ENST00000617989 482 ntBASIC17.79■□□□□ 0.44
PLOD3O60568 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.79■□□□□ 0.44
PLOD3O60568 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.79■□□□□ 0.44
PLOD3O60568 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.79■□□□□ 0.44
PLOD3O60568 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
PLOD3O60568 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PLOD3O60568 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PLOD3O60568 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.79■□□□□ 0.44
PLOD3O60568 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PLOD3O60568 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PLOD3O60568 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.78■□□□□ 0.44
PLOD3O60568 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 MIR718-201ENST00000390190 70 ntBASIC17.78■□□□□ 0.44
PLOD3O60568 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.78■□□□□ 0.44
PLOD3O60568 MESTP1-201ENST00000404287 994 ntBASIC17.78■□□□□ 0.44
PLOD3O60568 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.78■□□□□ 0.44
PLOD3O60568 AC116562.2-201ENST00000507042 360 ntBASIC17.78■□□□□ 0.44
PLOD3O60568 AC008550.1-201ENST00000511500 884 ntBASIC17.78■□□□□ 0.44
PLOD3O60568 NUDT16P1-203ENST00000513809 620 ntBASIC17.78■□□□□ 0.44
PLOD3O60568 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PLOD3O60568 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
PLOD3O60568 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.77■□□□□ 0.44
PLOD3O60568 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PLOD3O60568 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PLOD3O60568 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.77■□□□□ 0.44
PLOD3O60568 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PLOD3O60568 AC008040.2-201ENST00000461049 708 ntBASIC17.77■□□□□ 0.44
PLOD3O60568 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.77■□□□□ 0.44
PLOD3O60568 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.77■□□□□ 0.44
PLOD3O60568 AP006294.2-201ENST00000641667 209 ntBASIC17.77■□□□□ 0.44
PLOD3O60568 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PLOD3O60568 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PLOD3O60568 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PLOD3O60568 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.77■□□□□ 0.43
PLOD3O60568 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.77■□□□□ 0.43
PLOD3O60568 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PLOD3O60568 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PLOD3O60568 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.76■□□□□ 0.43
PLOD3O60568 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.76■□□□□ 0.43
PLOD3O60568 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.76■□□□□ 0.43
PLOD3O60568 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PLOD3O60568 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.76■□□□□ 0.43
PLOD3O60568 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.76■□□□□ 0.43
PLOD3O60568 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PLOD3O60568 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.76■□□□□ 0.43
PLOD3O60568 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PLOD3O60568 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.76■□□□□ 0.43
PLOD3O60568 FAM207BP-201ENST00000447172 505 ntBASIC17.76■□□□□ 0.43
PLOD3O60568 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.76■□□□□ 0.43
PLOD3O60568 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms