Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC007663.1-201ENST00000438948 1240 ntBASIC18.04■□□□□ 0.48
LCMT2O60294 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 TSPY17P-201ENST00000450329 467 ntBASIC18.04■□□□□ 0.48
LCMT2O60294 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 AP003041.3-201ENST00000527151 707 ntBASIC18.04■□□□□ 0.48
LCMT2O60294 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.04■□□□□ 0.48
LCMT2O60294 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LCMT2O60294 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LCMT2O60294 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.04■□□□□ 0.48
LCMT2O60294 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.04■□□□□ 0.48
LCMT2O60294 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LCMT2O60294 CROCCP3-202ENST00000420820 1947 ntBASIC18.04■□□□□ 0.48
LCMT2O60294 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LCMT2O60294 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.03■□□□□ 0.48
LCMT2O60294 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.03■□□□□ 0.48
LCMT2O60294 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.03■□□□□ 0.48
LCMT2O60294 CCR12P-201ENST00000446203 998 ntBASIC18.03■□□□□ 0.48
LCMT2O60294 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.03■□□□□ 0.48
LCMT2O60294 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.03■□□□□ 0.48
LCMT2O60294 ECEL1P2-202ENST00000465689 757 ntBASIC18.03■□□□□ 0.48
LCMT2O60294 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
LCMT2O60294 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LCMT2O60294 AC116562.4-202ENST00000641738 218 ntBASIC18.03■□□□□ 0.48
LCMT2O60294 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.03■□□□□ 0.48
LCMT2O60294 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LCMT2O60294 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.03■□□□□ 0.48
LCMT2O60294 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LCMT2O60294 LINC01568-207ENST00000641790 1380 ntBASIC18.03■□□□□ 0.48
LCMT2O60294 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.03■□□□□ 0.48
LCMT2O60294 GPAT2P1-201ENST00000444924 1672 ntBASIC18.03■□□□□ 0.48
LCMT2O60294 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LCMT2O60294 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
LCMT2O60294 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.02■□□□□ 0.48
LCMT2O60294 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.02■□□□□ 0.48
LCMT2O60294 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LCMT2O60294 AL023284.2-201ENST00000405850 579 ntBASIC18.02■□□□□ 0.48
LCMT2O60294 AC211429.1-201ENST00000415277 523 ntBASIC18.02■□□□□ 0.48
LCMT2O60294 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LCMT2O60294 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.02■□□□□ 0.48
LCMT2O60294 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.02■□□□□ 0.48
LCMT2O60294 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LCMT2O60294 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.02■□□□□ 0.48
LCMT2O60294 MIR4674-201ENST00000582457 87 ntBASIC18.02■□□□□ 0.48
LCMT2O60294 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.02■□□□□ 0.48
LCMT2O60294 AC133561.5-201ENST00000635547 218 ntBASIC18.02■□□□□ 0.48
LCMT2O60294 AC068587.9-201ENST00000641814 219 ntBASIC18.02■□□□□ 0.48
LCMT2O60294 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.02■□□□□ 0.47
LCMT2O60294 RCC2P3-201ENST00000418112 1537 ntBASIC18.02■□□□□ 0.47
LCMT2O60294 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
LCMT2O60294 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.01■□□□□ 0.47
LCMT2O60294 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LCMT2O60294 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
LCMT2O60294 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 AC093503.3-201ENST00000624917 2352 ntBASIC18.01■□□□□ 0.47
LCMT2O60294 AC004408.2-201ENST00000623613 2777 ntBASIC18.01■□□□□ 0.47
LCMT2O60294 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.01■□□□□ 0.47
LCMT2O60294 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LCMT2O60294 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LCMT2O60294 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
LCMT2O60294 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.01■□□□□ 0.47
LCMT2O60294 AC083906.6-201ENST00000641366 219 ntBASIC18.01■□□□□ 0.47
LCMT2O60294 HEIH-201ENST00000623091 1652 ntBASIC18.01■□□□□ 0.47
LCMT2O60294 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LCMT2O60294 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LCMT2O60294 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCMT2O60294 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCMT2O60294 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18■□□□□ 0.47
LCMT2O60294 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18■□□□□ 0.47
LCMT2O60294 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms