Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF13O43567 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RNF13O43567 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF13O43567 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RNF13O43567 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF13O43567 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF13O43567 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF13O43567 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF13O43567 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF13O43567 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF13O43567 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF13O43567 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF13O43567 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF13O43567 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RNF13O43567 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF13O43567 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF13O43567 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF13O43567 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF13O43567 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF13O43567 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF13O43567 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RNF13O43567 AL031598.1-201ENST00000561511 1773 ntBASIC17.17■□□□□ 0.34
RNF13O43567 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNF13O43567 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNF13O43567 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF13O43567 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF13O43567 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF13O43567 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF13O43567 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF13O43567 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF13O43567 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF13O43567 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF13O43567 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.17■□□□□ 0.34
RNF13O43567 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF13O43567 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF13O43567 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF13O43567 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF13O43567 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF13O43567 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 TSPY21P-201ENST00000433481 731 ntBASIC17.16■□□□□ 0.34
RNF13O43567 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RNF13O43567 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF13O43567 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF13O43567 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF13O43567 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF13O43567 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF13O43567 FEM1AP3-201ENST00000403722 1741 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms