Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
XRCC2O43543 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.41■□□□□ 0.22
XRCC2O43543 KRT8P11-201ENST00000409686 1436 ntBASIC16.41■□□□□ 0.22
XRCC2O43543 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.41■□□□□ 0.22
XRCC2O43543 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
XRCC2O43543 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.41■□□□□ 0.22
XRCC2O43543 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
XRCC2O43543 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.41■□□□□ 0.22
XRCC2O43543 Z98044.1-201ENST00000632503 1764 ntBASIC16.41■□□□□ 0.22
XRCC2O43543 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
XRCC2O43543 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.4■□□□□ 0.22
XRCC2O43543 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
XRCC2O43543 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.4■□□□□ 0.22
XRCC2O43543 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.4■□□□□ 0.22
XRCC2O43543 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
XRCC2O43543 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
XRCC2O43543 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
XRCC2O43543 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.4■□□□□ 0.22
XRCC2O43543 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.4■□□□□ 0.22
XRCC2O43543 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.4■□□□□ 0.22
XRCC2O43543 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.4■□□□□ 0.22
XRCC2O43543 UBE2SP1-201ENST00000450587 669 ntBASIC16.4■□□□□ 0.22
XRCC2O43543 AC091390.4-202ENST00000476426 537 ntBASIC16.4■□□□□ 0.22
XRCC2O43543 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.4■□□□□ 0.22
XRCC2O43543 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.4■□□□□ 0.22
XRCC2O43543 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.4■□□□□ 0.22
XRCC2O43543 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 AC011298.2-201ENST00000617989 482 ntBASIC16.4■□□□□ 0.22
XRCC2O43543 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.4■□□□□ 0.22
XRCC2O43543 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.4■□□□□ 0.22
XRCC2O43543 AL138781.2-201ENST00000617896 1843 ntBASIC16.4■□□□□ 0.22
XRCC2O43543 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
XRCC2O43543 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
XRCC2O43543 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
XRCC2O43543 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
XRCC2O43543 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.39■□□□□ 0.21
XRCC2O43543 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
XRCC2O43543 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
XRCC2O43543 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 AP001412.1-201ENST00000608405 714 ntBASIC16.39■□□□□ 0.21
XRCC2O43543 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.39■□□□□ 0.21
XRCC2O43543 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.39■□□□□ 0.21
XRCC2O43543 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.39■□□□□ 0.21
XRCC2O43543 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.39■□□□□ 0.21
XRCC2O43543 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
XRCC2O43543 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
XRCC2O43543 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
XRCC2O43543 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
XRCC2O43543 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
XRCC2O43543 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.38■□□□□ 0.21
XRCC2O43543 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
XRCC2O43543 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.38■□□□□ 0.21
XRCC2O43543 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.38■□□□□ 0.21
XRCC2O43543 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.38■□□□□ 0.21
XRCC2O43543 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.38■□□□□ 0.21
XRCC2O43543 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.38■□□□□ 0.21
XRCC2O43543 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.38■□□□□ 0.21
XRCC2O43543 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
XRCC2O43543 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms