Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLOCKO15516 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
CLOCKO15516 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLOCKO15516 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLOCKO15516 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.9■□□□□ 0.46
CLOCKO15516 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.9■□□□□ 0.46
CLOCKO15516 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLOCKO15516 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLOCKO15516 SDHAP1-207ENST00000440850 2000 ntBASIC17.9■□□□□ 0.46
CLOCKO15516 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLOCKO15516 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CLOCKO15516 KRT18P29-201ENST00000397031 1267 ntBASIC17.9■□□□□ 0.46
CLOCKO15516 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.9■□□□□ 0.46
CLOCKO15516 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLOCKO15516 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 C2orf69P4-201ENST00000565394 541 ntBASIC17.9■□□□□ 0.46
CLOCKO15516 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.9■□□□□ 0.46
CLOCKO15516 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.9■□□□□ 0.46
CLOCKO15516 TFP1-202ENST00000475455 1573 ntBASIC17.9■□□□□ 0.46
CLOCKO15516 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.9■□□□□ 0.46
CLOCKO15516 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLOCKO15516 ABALON-201ENST00000629058 1903 ntBASIC17.9■□□□□ 0.46
CLOCKO15516 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLOCKO15516 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLOCKO15516 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CLOCKO15516 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CLOCKO15516 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLOCKO15516 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.89■□□□□ 0.45
CLOCKO15516 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.89■□□□□ 0.45
CLOCKO15516 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CLOCKO15516 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.89■□□□□ 0.45
CLOCKO15516 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.89■□□□□ 0.45
CLOCKO15516 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.89■□□□□ 0.45
CLOCKO15516 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.89■□□□□ 0.45
CLOCKO15516 MYC-209ENST00000641252 345 ntBASIC17.89■□□□□ 0.45
CLOCKO15516 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
CLOCKO15516 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.89■□□□□ 0.45
CLOCKO15516 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.89■□□□□ 0.45
CLOCKO15516 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.89■□□□□ 0.45
CLOCKO15516 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CLOCKO15516 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLOCKO15516 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.89■□□□□ 0.45
CLOCKO15516 AC104417.2-201ENST00000562989 1793 ntBASIC17.89■□□□□ 0.45
CLOCKO15516 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLOCKO15516 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.89■□□□□ 0.45
CLOCKO15516 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.89■□□□□ 0.45
CLOCKO15516 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.88■□□□□ 0.45
CLOCKO15516 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.88■□□□□ 0.45
CLOCKO15516 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.88■□□□□ 0.45
CLOCKO15516 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLOCKO15516 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CLOCKO15516 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLOCKO15516 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.88■□□□□ 0.45
CLOCKO15516 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLOCKO15516 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 ANO7L1-203ENST00000602586 1720 ntBASIC17.88■□□□□ 0.45
CLOCKO15516 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLOCKO15516 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.88■□□□□ 0.45
CLOCKO15516 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLOCKO15516 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.87■□□□□ 0.45
CLOCKO15516 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms