Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NPC1O15118 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NPC1O15118 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.03■□□□□ 0.64
NPC1O15118 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.03■□□□□ 0.64
NPC1O15118 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
NPC1O15118 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.03■□□□□ 0.64
NPC1O15118 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NPC1O15118 SEC1P-202ENST00000473944 940 ntBASIC19.03■□□□□ 0.64
NPC1O15118 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.03■□□□□ 0.64
NPC1O15118 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.03■□□□□ 0.64
NPC1O15118 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.03■□□□□ 0.64
NPC1O15118 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.03■□□□□ 0.64
NPC1O15118 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NPC1O15118 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPC1O15118 FEM1AP3-201ENST00000403722 1741 ntBASIC19.03■□□□□ 0.64
NPC1O15118 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NPC1O15118 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.02■□□□□ 0.64
NPC1O15118 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NPC1O15118 HOXB1-202ENST00000577092 1414 ntBASIC19.02■□□□□ 0.64
NPC1O15118 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.02■□□□□ 0.64
NPC1O15118 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
NPC1O15118 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.02■□□□□ 0.64
NPC1O15118 AL645929.1-201ENST00000420084 975 ntBASIC19.02■□□□□ 0.64
NPC1O15118 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.02■□□□□ 0.64
NPC1O15118 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.02■□□□□ 0.64
NPC1O15118 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
NPC1O15118 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
NPC1O15118 AC093458.2-201ENST00000623150 629 ntBASIC19.02■□□□□ 0.64
NPC1O15118 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1O15118 AL512353.2-201ENST00000448759 1962 ntBASIC19.02■□□□□ 0.64
NPC1O15118 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1O15118 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1O15118 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1O15118 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1O15118 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.02■□□□□ 0.63
NPC1O15118 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.01■□□□□ 0.63
NPC1O15118 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1O15118 KRT18P48-201ENST00000434763 852 ntBASIC19.01■□□□□ 0.63
NPC1O15118 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NPC1O15118 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.01■□□□□ 0.63
NPC1O15118 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1O15118 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NPC1O15118 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.01■□□□□ 0.63
NPC1O15118 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NPC1O15118 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1O15118 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1O15118 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPC1O15118 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NPC1O15118 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1O15118 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19■□□□□ 0.63
NPC1O15118 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19■□□□□ 0.63
NPC1O15118 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NPC1O15118 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 ATP5G2P1-201ENST00000433580 426 ntBASIC19■□□□□ 0.63
NPC1O15118 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 HCG4P8-203ENST00000443049 980 ntBASIC19■□□□□ 0.63
NPC1O15118 SPDYE13P-201ENST00000445314 798 ntBASIC19■□□□□ 0.63
NPC1O15118 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NPC1O15118 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19■□□□□ 0.63
NPC1O15118 MIR3917-201ENST00000580971 93 ntBASIC19■□□□□ 0.63
NPC1O15118 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19■□□□□ 0.63
NPC1O15118 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1O15118 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms