Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDC7O00311 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CDC7O00311 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.52■□□□□ 0.56
CDC7O00311 MESTP1-201ENST00000404287 994 ntBASIC18.52■□□□□ 0.56
CDC7O00311 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.52■□□□□ 0.56
CDC7O00311 GCSHP5-201ENST00000443090 522 ntBASIC18.52■□□□□ 0.56
CDC7O00311 B3GAT3P1-201ENST00000471720 806 ntBASIC18.52■□□□□ 0.56
CDC7O00311 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDC7O00311 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.52■□□□□ 0.56
CDC7O00311 MIR6786-201ENST00000616843 113 ntBASIC18.52■□□□□ 0.56
CDC7O00311 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDC7O00311 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.52■□□□□ 0.56
CDC7O00311 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDC7O00311 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CDC7O00311 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CDC7O00311 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.52■□□□□ 0.55
CDC7O00311 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDC7O00311 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CDC7O00311 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.51■□□□□ 0.55
CDC7O00311 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDC7O00311 HEIH-201ENST00000623091 1652 ntBASIC18.51■□□□□ 0.55
CDC7O00311 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDC7O00311 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.51■□□□□ 0.55
CDC7O00311 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CDC7O00311 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.51■□□□□ 0.55
CDC7O00311 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.51■□□□□ 0.55
CDC7O00311 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDC7O00311 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDC7O00311 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.51■□□□□ 0.55
CDC7O00311 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.51■□□□□ 0.55
CDC7O00311 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.51■□□□□ 0.55
CDC7O00311 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDC7O00311 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.5■□□□□ 0.55
CDC7O00311 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.5■□□□□ 0.55
CDC7O00311 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.5■□□□□ 0.55
CDC7O00311 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.5■□□□□ 0.55
CDC7O00311 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
CDC7O00311 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.5■□□□□ 0.55
CDC7O00311 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.5■□□□□ 0.55
CDC7O00311 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.5■□□□□ 0.55
CDC7O00311 FAM207BP-201ENST00000447172 505 ntBASIC18.5■□□□□ 0.55
CDC7O00311 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDC7O00311 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDC7O00311 CKBP1-201ENST00000565489 1086 ntBASIC18.5■□□□□ 0.55
CDC7O00311 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.5■□□□□ 0.55
CDC7O00311 CD177P1-201ENST00000606252 935 ntBASIC18.5■□□□□ 0.55
CDC7O00311 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CDC7O00311 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.5■□□□□ 0.55
CDC7O00311 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDC7O00311 KRT8P3-201ENST00000519669 1449 ntBASIC18.49■□□□□ 0.55
CDC7O00311 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 AC090164.3-201ENST00000610780 2143 ntBASIC18.49■□□□□ 0.55
CDC7O00311 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 ABHD17AP1-201ENST00000358206 933 ntBASIC18.49■□□□□ 0.55
CDC7O00311 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.49■□□□□ 0.55
CDC7O00311 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.49■□□□□ 0.55
CDC7O00311 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.49■□□□□ 0.55
CDC7O00311 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.49■□□□□ 0.55
CDC7O00311 AC068587.9-201ENST00000641814 219 ntBASIC18.49■□□□□ 0.55
CDC7O00311 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDC7O00311 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms