Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 MMP23A-201ENST00000234610 1017 ntBASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 FAM197Y1-201ENST00000421178 764 ntBASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
SPDYE4A6NLX3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 TMPOP1-202ENST00000424642 1267 ntBASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.22■□□□□ 0.99
SPDYE4A6NLX3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 AC007688.1-201ENST00000475592 759 ntBASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 AP002982.1-201ENST00000492365 877 ntBASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 AC023632.3-201ENST00000521633 145 ntBASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.21■□□□□ 0.99
SPDYE4A6NLX3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
SPDYE4A6NLX3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.2■□□□□ 0.99
SPDYE4A6NLX3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 RCN1P1-201ENST00000400413 996 ntBASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 KATNBL1P2-201ENST00000433311 835 ntBASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPDYE4A6NLX3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms