Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.15■□□□□ 0.66
CAPN8A6NHC0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 FITM1-202ENST00000559294 800 ntBASIC19.15■□□□□ 0.66
CAPN8A6NHC0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CAPN8A6NHC0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CAPN8A6NHC0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.14■□□□□ 0.66
CAPN8A6NHC0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CAPN8A6NHC0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 MIR1238-201ENST00000408483 83 ntBASIC19.14■□□□□ 0.65
CAPN8A6NHC0 CRYGFP-201ENST00000418459 633 ntBASIC19.14■□□□□ 0.65
CAPN8A6NHC0 AL390955.1-201ENST00000428694 934 ntBASIC19.14■□□□□ 0.65
CAPN8A6NHC0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CAPN8A6NHC0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN8A6NHC0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN8A6NHC0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms