Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM235A6NFC5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 BX276092.2-201ENST00000417668 665 ntBASIC16.11■□□□□ 0.17
TMEM235A6NFC5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 AC133552.2-202ENST00000575694 574 ntBASIC16.11■□□□□ 0.17
TMEM235A6NFC5 RAP2CP1-201ENST00000605103 478 ntBASIC16.11■□□□□ 0.17
TMEM235A6NFC5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMEM235A6NFC5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 AC020916.1-201ENST00000587762 1774 ntBASIC16.1■□□□□ 0.17
TMEM235A6NFC5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TMEM235A6NFC5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.09■□□□□ 0.17
TMEM235A6NFC5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.09■□□□□ 0.17
TMEM235A6NFC5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.09■□□□□ 0.17
TMEM235A6NFC5 KRT18P16-201ENST00000510337 1294 ntBASIC16.09■□□□□ 0.17
TMEM235A6NFC5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms