Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRDV1A0A1B0GX56 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 NTF6G-201ENST00000591094 616 ntBASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 AC138028.4-201ENST00000564984 1845 ntBASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRDV1A0A1B0GX56 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRDV1A0A1B0GX56 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 AL512625.2-201ENST00000417533 625 ntBASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 AC005829.2-201ENST00000571422 1056 ntBASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 AC009053.2-201ENST00000563701 2365 ntBASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 AC012313.1-201ENST00000593393 3059 ntBASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRDV1A0A1B0GX56 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRDV1A0A1B0GX56 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms