Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 AF186192.3-201ENST00000583427 947 ntBASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 AC073195.1-201ENST00000607241 877 ntBASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 AL031985.4-201ENST00000642138 673 ntBASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 AL135905.2-201ENST00000584934 1404 ntBASIC18.32■□□□□ 0.52
PCDHGA11Q9Y5H2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 AC104581.1-202ENST00000635932 2618 ntBASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA11Q9Y5H2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AC005332.8-201ENST00000622750 2735 ntBASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 PRSS44-201ENST00000515154 1146 ntBASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AC026271.3-201ENST00000571884 352 ntBASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 CR392000.1-201ENST00000624770 1228 ntBASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA11Q9Y5H2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA11Q9Y5H2 AC009113.1-201ENST00000570267 2443 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms