Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
R3HCC1Q9Y3T6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
R3HCC1Q9Y3T6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 BX119927.1-201ENST00000636596 1552 ntBASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
R3HCC1Q9Y3T6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 KRT18P29-201ENST00000397031 1267 ntBASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 AC006058.3-201ENST00000606217 1069 ntBASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 PTBP1P-201ENST00000554374 1601 ntBASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
R3HCC1Q9Y3T6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
R3HCC1Q9Y3T6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
R3HCC1Q9Y3T6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms