Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 UNC93B5-201ENST00000530315 699 ntBASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 AC005332.8-201ENST00000622750 2735 ntBASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CHMP2BQ9UQN3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 AL354751.1-201ENST00000412768 1863 ntBASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 AC008403.3-201ENST00000598924 454 ntBASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 AC079598.2-202ENST00000546624 1451 ntBASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHMP2BQ9UQN3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHMP2BQ9UQN3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CHMP2BQ9UQN3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms