Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHA4Q9UN74 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
PCDHA4Q9UN74 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PCDHA4Q9UN74 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PCDHA4Q9UN74 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA4Q9UN74 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHA4Q9UN74 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 AC128688.1-201ENST00000487626 519 ntBASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 AC010653.2-201ENST00000623505 997 ntBASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 LINC01568-207ENST00000641790 1380 ntBASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 AC093525.10-201ENST00000625130 1569 ntBASIC21.57■■□□□ 1.04
PCDHA4Q9UN74 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 AL109659.2-201ENST00000606809 1674 ntBASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA4Q9UN74 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 MTMR9LP-203ENST00000426597 1545 ntBASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 AC145285.6-201ENST00000604632 637 ntBASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA4Q9UN74 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 MCCD1P1-208ENST00000445732 328 ntBASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 ECEL1P2-202ENST00000465689 757 ntBASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 AC012306.2-201ENST00000609350 630 ntBASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 FAM87A-204ENST00000613235 858 ntBASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 AC093503.3-201ENST00000624917 2352 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms