Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 AL050303.2-201ENST00000619798 666 ntBASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 MIR663A-201ENST00000385250 93 ntBASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 AC026185.1-201ENST00000445748 174 ntBASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMCC3Q9ULS5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 AC092368.3-202ENST00000574180 1591 ntBASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TMCC3Q9ULS5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 AC092118.2-201ENST00000613495 667 ntBASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.51■□□□□ 0.39
TMCC3Q9ULS5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 AC091874.3-201ENST00000512672 1195 ntBASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMCC3Q9ULS5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms