Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 AP000525.1-201ENST00000608286 694 ntBASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 SLC25A1P4-201ENST00000567977 778 ntBASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.67■□□□□ 0.74
PPARGC1AQ9UBK2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 MFAP1P1-201ENST00000442257 1255 ntBASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 BX088651.1-201ENST00000540551 451 ntBASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
PPARGC1AQ9UBK2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 CRYGFP-201ENST00000418459 633 ntBASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPARGC1AQ9UBK2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 AC093503.3-201ENST00000624917 2352 ntBASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PPARGC1AQ9UBK2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.64■□□□□ 0.73
PPARGC1AQ9UBK2 MMP23A-201ENST00000234610 1017 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms