Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 FAM197Y4-202ENST00000622692 608 ntBASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 AC073912.3-201ENST00000624414 853 ntBASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 C2orf69P4-201ENST00000565394 541 ntBASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 CYP2T3P-201ENST00000601990 817 ntBASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 AC083906.6-201ENST00000641366 219 ntBASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 AC073592.3-201ENST00000625118 1834 ntBASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.97■□□□□ 0.47
CCM2LQ9NUG4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 LSM12P1-201ENST00000411836 588 ntBASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 FAM210CP-201ENST00000445714 574 ntBASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 MIR4497-201ENST00000583208 89 ntBASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCM2LQ9NUG4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCM2LQ9NUG4 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.46
CCM2LQ9NUG4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2LQ9NUG4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms