Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB16Q9NRJ7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 PRORSD1P-202ENST00000563365 2154 ntBASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 AC139713.2-201ENST00000641328 2723 ntBASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 AC099398.1-201ENST00000567919 2776 ntBASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 AC104417.2-201ENST00000562989 1793 ntBASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 TNRC18P3-201ENST00000441896 2691 ntBASIC16.41■□□□□ 0.22
PCDHB16Q9NRJ7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 AC060766.5-201ENST00000590539 871 ntBASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 FP475955.4-201ENST00000623131 1990 ntBASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHB16Q9NRJ7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHB16Q9NRJ7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
PCDHB16Q9NRJ7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.39■□□□□ 0.22
PCDHB16Q9NRJ7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHB16Q9NRJ7 ID1-201ENST00000376105 1233 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms