Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 AL160286.2-201ENST00000567150 934 ntBASIC18.76■□□□□ 0.59
SSU72Q9NP77 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.76■□□□□ 0.59
SSU72Q9NP77 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSU72Q9NP77 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 AL499627.1-201ENST00000569373 2188 ntBASIC18.75■□□□□ 0.59
SSU72Q9NP77 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 AC105036.2-201ENST00000569468 176 ntBASIC18.75■□□□□ 0.59
SSU72Q9NP77 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 AC093677.2-201ENST00000600169 1863 ntBASIC18.75■□□□□ 0.59
SSU72Q9NP77 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.75■□□□□ 0.59
SSU72Q9NP77 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSU72Q9NP77 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
SSU72Q9NP77 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 AC134043.2-201ENST00000624206 2238 ntBASIC18.74■□□□□ 0.59
SSU72Q9NP77 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSU72Q9NP77 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSU72Q9NP77 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSU72Q9NP77 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSU72Q9NP77 AC138028.4-201ENST00000564984 1845 ntBASIC18.73■□□□□ 0.59
SSU72Q9NP77 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSU72Q9NP77 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 DUSP5P2-201ENST00000426873 1033 ntBASIC18.73■□□□□ 0.59
SSU72Q9NP77 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SSU72Q9NP77 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSU72Q9NP77 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms